Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 AC097376.2-205ENST00000610159 5334 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 LINC00554-201ENST00000564841 3011 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CEACAM3P40198 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 AC125807.1-201ENST00000483097 614 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.07□□□□□ -0.32
CEACAM3P40198 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.07□□□□□ -0.32
CEACAM3P40198 AC105021.1-202ENST00000570572 669 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 MIR4453-201ENST00000584019 89 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 AC015911.4-201ENST00000588022 1070 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.07□□□□□ -0.32
CEACAM3P40198 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.07□□□□□ -0.32
CEACAM3P40198 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 TUBB3P1-201ENST00000405796 1332 ntBASIC13.07□□□□□ -0.32
CEACAM3P40198 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.07□□□□□ -0.32
CEACAM3P40198 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.07□□□□□ -0.32
CEACAM3P40198 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.07□□□□□ -0.32
CEACAM3P40198 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CEACAM3P40198 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 MTND6P24-201ENST00000440466 518 ntBASIC13.06□□□□□ -0.32
CEACAM3P40198 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 KLF2P3-201ENST00000451977 1087 ntBASIC13.06□□□□□ -0.32
CEACAM3P40198 AC109322.1-201ENST00000524499 1264 ntBASIC13.06□□□□□ -0.32
CEACAM3P40198 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.06□□□□□ -0.32
CEACAM3P40198 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CEACAM3P40198 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.06□□□□□ -0.32
CEACAM3P40198 Z92544.3-201ENST00000624747 417 ntBASIC13.06□□□□□ -0.32
CEACAM3P40198 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CEACAM3P40198 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.06□□□□□ -0.32
CEACAM3P40198 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CEACAM3P40198 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms