Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.16■□□□□ 0.02
RORAP35398 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.16■□□□□ 0.02
RORAP35398 CHCHD2P3-201ENST00000603038 451 ntBASIC15.16■□□□□ 0.02
RORAP35398 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.16■□□□□ 0.02
RORAP35398 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.16■□□□□ 0.02
RORAP35398 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.16■□□□□ 0.02
RORAP35398 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RORAP35398 AC092364.2-201ENST00000596710 2692 ntBASIC15.16■□□□□ 0.02
RORAP35398 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.16■□□□□ 0.02
RORAP35398 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 AL662844.4-201ENST00000606367 2838 ntBASIC15.16■□□□□ 0.02
RORAP35398 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.15■□□□□ 0.02
RORAP35398 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.15■□□□□ 0.02
RORAP35398 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RORAP35398 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.15■□□□□ 0.02
RORAP35398 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.15■□□□□ 0.02
RORAP35398 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.15■□□□□ 0.02
RORAP35398 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.15■□□□□ 0.02
RORAP35398 AL589987.1-201ENST00000453380 819 ntBASIC15.15■□□□□ 0.02
RORAP35398 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.15■□□□□ 0.02
RORAP35398 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.15■□□□□ 0.02
RORAP35398 AC055876.2-201ENST00000531834 546 ntBASIC15.15■□□□□ 0.02
RORAP35398 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.15■□□□□ 0.02
RORAP35398 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.15■□□□□ 0.02
RORAP35398 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RORAP35398 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.15■□□□□ 0.02
RORAP35398 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.15■□□□□ 0.02
RORAP35398 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
RORAP35398 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.15■□□□□ 0.02
RORAP35398 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RORAP35398 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.15■□□□□ 0.02
RORAP35398 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.15■□□□□ 0.02
RORAP35398 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 AC006449.5-201ENST00000610658 2098 ntBASIC15.15■□□□□ 0.02
RORAP35398 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RORAP35398 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
RORAP35398 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RORAP35398 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms