Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 AL161772.1-201ENST00000610494 4412 ntBASIC16.9■□□□□ 0.3
CTNNA1P35221 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 AC104109.2-201ENST00000602919 1418 ntBASIC16.9■□□□□ 0.3
CTNNA1P35221 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 KRT18P2-201ENST00000447938 1258 ntBASIC16.9■□□□□ 0.3
CTNNA1P35221 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.9■□□□□ 0.3
CTNNA1P35221 AC009078.2-202ENST00000463353 338 ntBASIC16.9■□□□□ 0.3
CTNNA1P35221 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.9■□□□□ 0.3
CTNNA1P35221 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 KRT126P-201ENST00000549467 1181 ntBASIC16.9■□□□□ 0.3
CTNNA1P35221 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.9■□□□□ 0.3
CTNNA1P35221 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.9■□□□□ 0.3
CTNNA1P35221 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.9■□□□□ 0.3
CTNNA1P35221 AC068137.2-201ENST00000605408 478 ntBASIC16.9■□□□□ 0.3
CTNNA1P35221 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.9■□□□□ 0.3
CTNNA1P35221 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNNA1P35221 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNNA1P35221 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTNNA1P35221 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTNNA1P35221 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTNNA1P35221 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.89■□□□□ 0.29
CTNNA1P35221 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.89■□□□□ 0.29
CTNNA1P35221 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CTNNA1P35221 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.89■□□□□ 0.29
CTNNA1P35221 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.89■□□□□ 0.29
CTNNA1P35221 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.89■□□□□ 0.29
CTNNA1P35221 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.89■□□□□ 0.29
CTNNA1P35221 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CTNNA1P35221 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.89■□□□□ 0.29
CTNNA1P35221 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CTNNA1P35221 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTNNA1P35221 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CTNNA1P35221 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms