Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HOXC12P31275 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HOXC12P31275 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXC12P31275 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HOXC12P31275 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HOXC12P31275 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.19□□□□□ -0.14
HOXC12P31275 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXC12P31275 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HOXC12P31275 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HOXC12P31275 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HOXC12P31275 SPTLC1P1-201ENST00000447199 261 ntBASIC14.19□□□□□ -0.14
HOXC12P31275 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 AC105021.1-202ENST00000570572 669 ntBASIC14.19□□□□□ -0.14
HOXC12P31275 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.19□□□□□ -0.14
HOXC12P31275 AC073592.8-201ENST00000624126 511 ntBASIC14.19□□□□□ -0.14
HOXC12P31275 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.19□□□□□ -0.14
HOXC12P31275 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HOXC12P31275 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HOXC12P31275 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HOXC12P31275 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 REXO1L8P-201ENST00000604378 1897 ntBASIC14.18□□□□□ -0.14
HOXC12P31275 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 AC022144.1-201ENST00000602255 1580 ntBASIC14.18□□□□□ -0.14
HOXC12P31275 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.18□□□□□ -0.14
HOXC12P31275 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 U91328.1-201ENST00000437528 223 ntBASIC14.18□□□□□ -0.14
HOXC12P31275 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.18□□□□□ -0.14
HOXC12P31275 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.18□□□□□ -0.14
HOXC12P31275 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 AC061975.2-201ENST00000581722 295 ntBASIC14.18□□□□□ -0.14
HOXC12P31275 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 AL589739.1-201ENST00000607720 493 ntBASIC14.18□□□□□ -0.14
HOXC12P31275 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HOXC12P31275 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXC12P31275 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HOXC12P31275 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXC12P31275 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms