Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NCLP19338 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
NCLP19338 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCLP19338 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NCLP19338 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NCLP19338 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCLP19338 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCLP19338 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NCLP19338 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
NCLP19338 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCLP19338 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC19.11■□□□□ 0.65
NCLP19338 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NCLP19338 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCLP19338 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.11■□□□□ 0.65
NCLP19338 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCLP19338 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NCLP19338 AL353732.1-201ENST00000569618 1459 ntBASIC19.1■□□□□ 0.65
NCLP19338 AP002414.3-201ENST00000589352 1468 ntBASIC19.1■□□□□ 0.65
NCLP19338 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.1■□□□□ 0.65
NCLP19338 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 AC104109.2-201ENST00000602919 1418 ntBASIC19.1■□□□□ 0.65
NCLP19338 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 KRT18P27-201ENST00000427733 1299 ntBASIC19.1■□□□□ 0.65
NCLP19338 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.1■□□□□ 0.65
NCLP19338 RNA5SP415-201ENST00000517246 115 ntBASIC19.1■□□□□ 0.65
NCLP19338 AC087641.1-201ENST00000557561 1021 ntBASIC19.1■□□□□ 0.65
NCLP19338 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.1■□□□□ 0.65
NCLP19338 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.1■□□□□ 0.65
NCLP19338 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 AP001350.2-201ENST00000625104 1094 ntBASIC19.1■□□□□ 0.65
NCLP19338 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.1■□□□□ 0.65
NCLP19338 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NCLP19338 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NCLP19338 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCLP19338 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.09■□□□□ 0.65
NCLP19338 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 POLD2P1-201ENST00000511220 997 ntBASIC19.09■□□□□ 0.65
NCLP19338 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 AC107918.2-201ENST00000530817 355 ntBASIC19.09■□□□□ 0.65
NCLP19338 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 AC034105.1-201ENST00000563488 319 ntBASIC19.09■□□□□ 0.65
NCLP19338 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.09■□□□□ 0.65
NCLP19338 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.09■□□□□ 0.65
NCLP19338 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NCLP19338 AL009178.2-201ENST00000597278 2719 ntBASIC19.09■□□□□ 0.65
NCLP19338 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NCLP19338 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCLP19338 AC023157.3-201ENST00000619086 2088 ntBASIC19.09■□□□□ 0.65
NCLP19338 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.09■□□□□ 0.65
NCLP19338 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCLP19338 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCLP19338 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
NCLP19338 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCLP19338 AC136621.1-201ENST00000624017 2304 ntBASIC19.08■□□□□ 0.65
NCLP19338 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.08■□□□□ 0.65
NCLP19338 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
NCLP19338 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NCLP19338 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NCLP19338 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.08■□□□□ 0.65
NCLP19338 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCLP19338 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms