Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 CDC14C-201ENST00000428251 1719 ntBASIC14.85□□□□□ -0.03
PEPDP12955 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PEPDP12955 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PEPDP12955 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 AC144831.1-201ENST00000573312 2656 ntBASIC14.85□□□□□ -0.03
PEPDP12955 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.85□□□□□ -0.03
PEPDP12955 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.85□□□□□ -0.03
PEPDP12955 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PEPDP12955 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PEPDP12955 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.85□□□□□ -0.03
PEPDP12955 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PEPDP12955 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.84□□□□□ -0.03
PEPDP12955 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PEPDP12955 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.84□□□□□ -0.03
PEPDP12955 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
PEPDP12955 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 MIR648-201ENST00000385046 94 ntBASIC14.84□□□□□ -0.03
PEPDP12955 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.84□□□□□ -0.03
PEPDP12955 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.84□□□□□ -0.03
PEPDP12955 RBPMS2P1-201ENST00000437762 623 ntBASIC14.84□□□□□ -0.03
PEPDP12955 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.84□□□□□ -0.03
PEPDP12955 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.84□□□□□ -0.03
PEPDP12955 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.84□□□□□ -0.03
PEPDP12955 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 AC112504.1-201ENST00000623415 1841 ntBASIC14.84□□□□□ -0.03
PEPDP12955 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 LINC02447-202ENST00000501888 2146 ntBASIC14.84□□□□□ -0.03
PEPDP12955 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PEPDP12955 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 AP005117.1-202ENST00000581724 1908 ntBASIC14.84□□□□□ -0.03
PEPDP12955 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.84□□□□□ -0.03
PEPDP12955 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PEPDP12955 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
PEPDP12955 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PEPDP12955 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.83□□□□□ -0.03
PEPDP12955 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PEPDP12955 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.83□□□□□ -0.03
PEPDP12955 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PEPDP12955 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.83□□□□□ -0.03
PEPDP12955 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PEPDP12955 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PEPDP12955 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PEPDP12955 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PEPDP12955 AL592424.1-201ENST00000563624 1536 ntBASIC14.83□□□□□ -0.04
PEPDP12955 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PEPDP12955 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PEPDP12955 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms