Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PI4KAP1-204ENST00000612579 1703 ntBASIC15.53■□□□□ 0.08
LINGO3P0C6S8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINGO3P0C6S8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 AC092910.1-201ENST00000482027 1129 ntBASIC15.52■□□□□ 0.08
LINGO3P0C6S8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.52■□□□□ 0.08
LINGO3P0C6S8 AF228730.7-201ENST00000641842 219 ntBASIC15.52■□□□□ 0.08
LINGO3P0C6S8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.52■□□□□ 0.07
LINGO3P0C6S8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINGO3P0C6S8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 KRT8P49-201ENST00000604166 1432 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 BEND3P1-201ENST00000421591 1944 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 DUX4L17-201ENST00000557360 1267 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 AC008667.4-201ENST00000607370 168 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 AC117500.6-201ENST00000624871 588 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 AC005593.1-201ENST00000624894 515 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 AC091951.1-201ENST00000512854 2465 ntBASIC15.51■□□□□ 0.07
LINGO3P0C6S8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINGO3P0C6S8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINGO3P0C6S8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINGO3P0C6S8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms