Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBB4AP04350 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBB4AP04350 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBB4AP04350 MIR4321-201ENST00000592276 80 ntBASIC17.14■□□□□ 0.33
TUBB4AP04350 AL121672.3-201ENST00000608644 468 ntBASIC17.14■□□□□ 0.33
TUBB4AP04350 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBB4AP04350 AL121956.5-201ENST00000625261 221 ntBASIC17.14■□□□□ 0.33
TUBB4AP04350 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TUBB4AP04350 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TUBB4AP04350 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TUBB4AP04350 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
TUBB4AP04350 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB4AP04350 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 AC005840.4-201ENST00000541242 2494 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 REXO1L1P-202ENST00000608646 1974 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBB4AP04350 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBB4AP04350 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 IGHV3-47-201ENST00000425060 335 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.13■□□□□ 0.33
TUBB4AP04350 BX276092.5-203ENST00000456199 560 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.13■□□□□ 0.33
TUBB4AP04350 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.13■□□□□ 0.33
TUBB4AP04350 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 AC139887.3-201ENST00000568585 713 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TUBB4AP04350 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBB4AP04350 AL358472.4-201ENST00000633140 710 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TUBB4AP04350 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
TUBB4AP04350 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 AC005252.3-201ENST00000623855 2258 ntBASIC17.13■□□□□ 0.33
TUBB4AP04350 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TUBB4AP04350 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBB4AP04350 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBB4AP04350 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 AC012569.1-201ENST00000591191 1524 ntBASIC17.12■□□□□ 0.33
TUBB4AP04350 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms