Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC069262.1-201ENST00000539058 672 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 AC093028.1-201ENST00000622998 982 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV3P03979 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRGV3P03979 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV3P03979 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
TRGV3P03979 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV3P03979 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV3P03979 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV3P03979 AL512356.2-201ENST00000546955 174 ntBASIC12.6□□□□□ -0.39
TRGV3P03979 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV3P03979 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV3P03979 AC243562.2-201ENST00000561247 970 ntBASIC12.6□□□□□ -0.39
TRGV3P03979 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.6□□□□□ -0.39
TRGV3P03979 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
TRGV3P03979 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 Z92544.3-201ENST00000624747 417 ntBASIC12.6□□□□□ -0.39
TRGV3P03979 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 PCDHA3-202ENST00000532566 4594 ntBASIC12.6□□□□□ -0.39
TRGV3P03979 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRGV3P03979 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV3P03979 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 AC008677.1-201ENST00000519230 1561 ntBASIC12.6□□□□□ -0.39
TRGV3P03979 PAUPAR-201ENST00000630360 2965 ntBASIC12.6□□□□□ -0.39
TRGV3P03979 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV3P03979 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TRGV3P03979 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRGV3P03979 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV3P03979 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms