Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.84■□□□□ 0.45
GGPS1O95749 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GGPS1O95749 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.83■□□□□ 0.45
GGPS1O95749 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
GGPS1O95749 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
GGPS1O95749 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.83■□□□□ 0.45
GGPS1O95749 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
GGPS1O95749 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
GGPS1O95749 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GGPS1O95749 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
GGPS1O95749 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GGPS1O95749 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 TMEM14DP-201ENST00000422205 345 ntBASIC17.83■□□□□ 0.44
GGPS1O95749 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.83■□□□□ 0.44
GGPS1O95749 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
GGPS1O95749 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.83■□□□□ 0.44
GGPS1O95749 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.83■□□□□ 0.44
GGPS1O95749 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.83■□□□□ 0.44
GGPS1O95749 AL162274.1-201ENST00000617191 1098 ntBASIC17.83■□□□□ 0.44
GGPS1O95749 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.83■□□□□ 0.44
GGPS1O95749 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.83■□□□□ 0.44
GGPS1O95749 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.83■□□□□ 0.44
GGPS1O95749 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GGPS1O95749 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GGPS1O95749 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GGPS1O95749 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 AC092364.2-201ENST00000596710 2692 ntBASIC17.82■□□□□ 0.44
GGPS1O95749 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.82■□□□□ 0.44
GGPS1O95749 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.82■□□□□ 0.44
GGPS1O95749 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
GGPS1O95749 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 AC079776.1-201ENST00000401540 1152 ntBASIC17.82■□□□□ 0.44
GGPS1O95749 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.82■□□□□ 0.44
GGPS1O95749 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.82■□□□□ 0.44
GGPS1O95749 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.82■□□□□ 0.44
GGPS1O95749 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.82■□□□□ 0.44
GGPS1O95749 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.82■□□□□ 0.44
GGPS1O95749 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GGPS1O95749 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GGPS1O95749 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.82■□□□□ 0.44
GGPS1O95749 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GGPS1O95749 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.82■□□□□ 0.44
GGPS1O95749 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.81■□□□□ 0.44
GGPS1O95749 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.81■□□□□ 0.44
GGPS1O95749 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.81■□□□□ 0.44
GGPS1O95749 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
GGPS1O95749 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.81■□□□□ 0.44
GGPS1O95749 AC136604.1-201ENST00000418535 575 ntBASIC17.81■□□□□ 0.44
GGPS1O95749 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.81■□□□□ 0.44
GGPS1O95749 AC112492.5-201ENST00000421897 457 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms