Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
UPK1BO75841 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 Z82170.1-201ENST00000625081 3192 ntBASIC13.92□□□□□ -0.18
UPK1BO75841 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
UPK1BO75841 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 AC113367.3-201ENST00000508316 1912 ntBASIC13.92□□□□□ -0.18
UPK1BO75841 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
UPK1BO75841 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
UPK1BO75841 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 GCSHP2-201ENST00000560971 527 ntBASIC13.92□□□□□ -0.18
UPK1BO75841 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.92□□□□□ -0.18
UPK1BO75841 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.92□□□□□ -0.18
UPK1BO75841 CYP2A7P1-201ENST00000595391 815 ntBASIC13.92□□□□□ -0.18
UPK1BO75841 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
UPK1BO75841 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK1BO75841 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 AC148477.5-201ENST00000625164 1645 ntBASIC13.91□□□□□ -0.18
UPK1BO75841 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK1BO75841 TSPY14P-201ENST00000303979 915 ntBASIC13.91□□□□□ -0.18
UPK1BO75841 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1BO75841 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1BO75841 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 RPPH1-201ENST00000516869 333 ntBASIC13.91□□□□□ -0.18
UPK1BO75841 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 ZNF444P1-201ENST00000559497 298 ntBASIC13.91□□□□□ -0.18
UPK1BO75841 AC091167.2-201ENST00000579581 588 ntBASIC13.91□□□□□ -0.18
UPK1BO75841 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1BO75841 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK1BO75841 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK1BO75841 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK1BO75841 WASH6P-202ENST00000359512 1437 ntBASIC13.9□□□□□ -0.18
UPK1BO75841 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1BO75841 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1BO75841 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms