Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ZIC3O60481 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 AP003680.1-201ENST00000598970 3660 ntBASIC14.29□□□□□ -0.12
ZIC3O60481 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC3O60481 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZIC3O60481 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZIC3O60481 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZIC3O60481 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC3O60481 TOMM22P5-201ENST00000416399 439 ntBASIC14.29□□□□□ -0.12
ZIC3O60481 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC3O60481 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.29□□□□□ -0.12
ZIC3O60481 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 API5-211ENST00000534695 560 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 TPRX2P-201ENST00000535362 881 ntBASIC14.29□□□□□ -0.12
ZIC3O60481 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZIC3O60481 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.29□□□□□ -0.12
ZIC3O60481 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ZIC3O60481 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 FER1L4-210ENST00000615531 5998 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ZIC3O60481 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ZIC3O60481 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC3O60481 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.28□□□□□ -0.12
ZIC3O60481 AC015922.1-201ENST00000421102 1152 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 DFFBP1-201ENST00000433250 979 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 CRB3P1-201ENST00000449338 276 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.28□□□□□ -0.12
ZIC3O60481 AC093004.1-201ENST00000508850 424 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 SLED1-202ENST00000512051 380 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms