Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCA5O60264 AL607033.1-201ENST00000623900 1599 ntBASIC19.66■□□□□ 0.74
SMARCA5O60264 AC013268.4-201ENST00000637413 2228 ntBASIC19.66■□□□□ 0.74
SMARCA5O60264 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMARCA5O60264 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMARCA5O60264 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
SMARCA5O60264 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 TREML5P-201ENST00000421694 576 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 AC092580.3-201ENST00000430932 139 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 CNN2P2-201ENST00000443536 909 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 CNN2P3-201ENST00000450201 906 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 KLF2P3-201ENST00000451977 1087 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 AL136317.3-201ENST00000618497 906 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCA5O60264 PPT1-215ENST00000641471 2368 ntBASIC19.65■□□□□ 0.74
SMARCA5O60264 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMARCA5O60264 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCA5O60264 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.64■□□□□ 0.74
SMARCA5O60264 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.64■□□□□ 0.74
SMARCA5O60264 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.64■□□□□ 0.74
SMARCA5O60264 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 AC092384.3-202ENST00000564646 2873 ntBASIC19.64■□□□□ 0.73
SMARCA5O60264 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCA5O60264 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.64■□□□□ 0.73
SMARCA5O60264 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 FO538757.1-201ENST00000623083 1397 ntBASIC19.64■□□□□ 0.73
SMARCA5O60264 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 CETN4P-206ENST00000642099 2168 ntBASIC19.64■□□□□ 0.73
SMARCA5O60264 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCA5O60264 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCA5O60264 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCA5O60264 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCA5O60264 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SMARCA5O60264 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCA5O60264 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCA5O60264 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SMARCA5O60264 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SMARCA5O60264 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCA5O60264 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SMARCA5O60264 TEX28P1-201ENST00000613479 1221 ntBASIC19.63■□□□□ 0.73
SMARCA5O60264 AC106028.4-201ENST00000614509 607 ntBASIC19.63■□□□□ 0.73
SMARCA5O60264 TEX28P2-201ENST00000617764 1221 ntBASIC19.63■□□□□ 0.73
SMARCA5O60264 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCA5O60264 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCA5O60264 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCA5O60264 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCA5O60264 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms