Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.26■□□□□ 0.35
EXTL3O43909 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.26■□□□□ 0.35
EXTL3O43909 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.26■□□□□ 0.35
EXTL3O43909 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.26■□□□□ 0.35
EXTL3O43909 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
EXTL3O43909 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 AP003680.1-201ENST00000598970 3660 ntBASIC17.26■□□□□ 0.35
EXTL3O43909 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.26■□□□□ 0.35
EXTL3O43909 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.26■□□□□ 0.35
EXTL3O43909 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.25■□□□□ 0.35
EXTL3O43909 BTBD7P1-201ENST00000447253 1453 ntBASIC17.25■□□□□ 0.35
EXTL3O43909 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
EXTL3O43909 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.25■□□□□ 0.35
EXTL3O43909 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.25■□□□□ 0.35
EXTL3O43909 MRPS18AP1-201ENST00000414458 589 ntBASIC17.25■□□□□ 0.35
EXTL3O43909 AC074338.1-201ENST00000416825 156 ntBASIC17.25■□□□□ 0.35
EXTL3O43909 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.25■□□□□ 0.35
EXTL3O43909 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
EXTL3O43909 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.25■□□□□ 0.35
EXTL3O43909 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.25■□□□□ 0.35
EXTL3O43909 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.25■□□□□ 0.35
EXTL3O43909 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.25■□□□□ 0.35
EXTL3O43909 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.25■□□□□ 0.35
EXTL3O43909 AC074044.1-201ENST00000609673 707 ntBASIC17.25■□□□□ 0.35
EXTL3O43909 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.25■□□□□ 0.35
EXTL3O43909 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.25■□□□□ 0.35
EXTL3O43909 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
EXTL3O43909 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 PRAL-201ENST00000624952 3286 ntBASIC17.25■□□□□ 0.35
EXTL3O43909 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EXTL3O43909 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
EXTL3O43909 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
EXTL3O43909 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 AC236430.1-201ENST00000402231 743 ntBASIC17.24■□□□□ 0.35
EXTL3O43909 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.24■□□□□ 0.35
EXTL3O43909 AC005034.1-201ENST00000426657 489 ntBASIC17.24■□□□□ 0.35
EXTL3O43909 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.24■□□□□ 0.35
EXTL3O43909 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.24■□□□□ 0.35
EXTL3O43909 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.24■□□□□ 0.35
EXTL3O43909 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.24■□□□□ 0.35
EXTL3O43909 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
EXTL3O43909 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
EXTL3O43909 AC008738.7-201ENST00000609744 511 ntBASIC17.24■□□□□ 0.35
EXTL3O43909 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.24■□□□□ 0.35
EXTL3O43909 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.24■□□□□ 0.35
EXTL3O43909 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.24■□□□□ 0.35
EXTL3O43909 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EXTL3O43909 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EXTL3O43909 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
EXTL3O43909 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms