Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC004790.1-201ENST00000612686 536 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 AC004461.2-201ENST00000629517 803 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 AL603832.2-201ENST00000566195 2125 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 PKD1P5-201ENST00000532415 10291 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 PRAL-201ENST00000624952 3286 ntBASIC17.92■□□□□ 0.46
CHMP2AO43633 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHMP2AO43633 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHMP2AO43633 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.92■□□□□ 0.46
CHMP2AO43633 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 FAM207CP-201ENST00000443486 507 ntBASIC17.92■□□□□ 0.46
CHMP2AO43633 GNAQP1-201ENST00000444815 1067 ntBASIC17.92■□□□□ 0.46
CHMP2AO43633 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 ZNF890P-202ENST00000530367 1156 ntBASIC17.92■□□□□ 0.46
CHMP2AO43633 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2AO43633 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 AC009118.2-201ENST00000613275 655 ntBASIC17.92■□□□□ 0.46
CHMP2AO43633 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CHMP2AO43633 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHMP2AO43633 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHMP2AO43633 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2AO43633 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2AO43633 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 HYMAI-201ENST00000635591 3347 ntBASIC17.91■□□□□ 0.46
CHMP2AO43633 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.91■□□□□ 0.46
CHMP2AO43633 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 AL450472.2-201ENST00000603663 1156 ntBASIC17.91■□□□□ 0.46
CHMP2AO43633 AC004233.3-201ENST00000607794 1269 ntBASIC17.91■□□□□ 0.46
CHMP2AO43633 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.91■□□□□ 0.46
CHMP2AO43633 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CHMP2AO43633 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHMP2AO43633 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP2AO43633 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP2AO43633 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP2AO43633 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP2AO43633 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms