Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
XRCC2O43543 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
XRCC2O43543 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
XRCC2O43543 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.93□□□□□ -0.18
XRCC2O43543 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
XRCC2O43543 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
XRCC2O43543 AC104640.1-201ENST00000562617 2109 ntBASIC13.93□□□□□ -0.18
XRCC2O43543 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
XRCC2O43543 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
XRCC2O43543 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
XRCC2O43543 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.92□□□□□ -0.18
XRCC2O43543 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.92□□□□□ -0.18
XRCC2O43543 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 MIR3687-2-201ENST00000577708 61 ntBASIC13.92□□□□□ -0.18
XRCC2O43543 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.92□□□□□ -0.18
XRCC2O43543 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.92□□□□□ -0.18
XRCC2O43543 MIR3687-1-201ENST00000614492 61 ntBASIC13.92□□□□□ -0.18
XRCC2O43543 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 AC084121.4-201ENST00000641598 221 ntBASIC13.92□□□□□ -0.18
XRCC2O43543 AF228730.8-201ENST00000642140 221 ntBASIC13.92□□□□□ -0.18
XRCC2O43543 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
XRCC2O43543 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.92□□□□□ -0.18
XRCC2O43543 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
XRCC2O43543 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.91□□□□□ -0.18
XRCC2O43543 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.91□□□□□ -0.18
XRCC2O43543 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.91□□□□□ -0.18
XRCC2O43543 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 AL691432.1-201ENST00000596308 1422 ntBASIC13.91□□□□□ -0.18
XRCC2O43543 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 AC134407.2-201ENST00000625089 1978 ntBASIC13.91□□□□□ -0.18
XRCC2O43543 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.91□□□□□ -0.18
XRCC2O43543 AC004987.2-201ENST00000395959 1148 ntBASIC13.91□□□□□ -0.18
XRCC2O43543 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 AL139010.1-201ENST00000454878 894 ntBASIC13.91□□□□□ -0.18
XRCC2O43543 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.91□□□□□ -0.18
XRCC2O43543 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.91□□□□□ -0.18
XRCC2O43543 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.91□□□□□ -0.18
XRCC2O43543 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.91□□□□□ -0.18
XRCC2O43543 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms