Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CLOCKO15516 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 AC104109.2-201ENST00000602919 1418 ntBASIC15.26■□□□□ 0.03
CLOCKO15516 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLOCKO15516 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 AL359258.3-201ENST00000622910 2331 ntBASIC15.25■□□□□ 0.03
CLOCKO15516 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.25■□□□□ 0.03
CLOCKO15516 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.25■□□□□ 0.03
CLOCKO15516 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 AC117500.6-201ENST00000624871 588 ntBASIC15.25■□□□□ 0.03
CLOCKO15516 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.25■□□□□ 0.03
CLOCKO15516 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLOCKO15516 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.25■□□□□ 0.03
CLOCKO15516 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLOCKO15516 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 AC098831.1-202ENST00000438821 336 ntBASIC15.24■□□□□ 0.03
CLOCKO15516 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.24■□□□□ 0.03
CLOCKO15516 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.24■□□□□ 0.03
CLOCKO15516 AC092865.5-201ENST00000545435 363 ntBASIC15.24■□□□□ 0.03
CLOCKO15516 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 AC008735.5-201ENST00000623544 497 ntBASIC15.24■□□□□ 0.03
CLOCKO15516 AP001350.2-201ENST00000625104 1094 ntBASIC15.24■□□□□ 0.03
CLOCKO15516 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 AL353732.1-201ENST00000569618 1459 ntBASIC15.24■□□□□ 0.03
CLOCKO15516 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLOCKO15516 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.24■□□□□ 0.03
CLOCKO15516 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.24■□□□□ 0.03
CLOCKO15516 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms