Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC26.64■■□□□ 1.86
CUX2O14529 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC26.64■■□□□ 1.86
CUX2O14529 AC245100.5-201ENST00000452108 331 ntBASIC26.64■■□□□ 1.86
CUX2O14529 AC026410.1-201ENST00000507366 1101 ntBASIC26.64■■□□□ 1.86
CUX2O14529 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
CUX2O14529 FOS-204ENST00000554617 796 ntTSL 2 BASIC26.64■■□□□ 1.86
CUX2O14529 AC073413.1-201ENST00000603927 732 ntBASIC26.64■■□□□ 1.86
CUX2O14529 AC103810.10-201ENST00000606504 343 ntBASIC26.64■■□□□ 1.86
CUX2O14529 PTPN20CP-201ENST00000614090 920 ntBASIC26.64■■□□□ 1.86
CUX2O14529 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC26.64■■□□□ 1.86
CUX2O14529 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CUX2O14529 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CUX2O14529 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
CUX2O14529 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.85
CUX2O14529 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CUX2O14529 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.85
CUX2O14529 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC26.64■■□□□ 1.85
CUX2O14529 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CUX2O14529 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CUX2O14529 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC26.64■■□□□ 1.85
CUX2O14529 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
CUX2O14529 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC26.63■■□□□ 1.85
CUX2O14529 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 AC004522.1-201ENST00000419978 654 ntBASIC26.63■■□□□ 1.85
CUX2O14529 NAGK-204ENST00000443872 878 ntTSL 3 BASIC26.63■■□□□ 1.85
CUX2O14529 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
CUX2O14529 HIST2H2BB-201ENST00000449108 381 ntBASIC26.63■■□□□ 1.85
CUX2O14529 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC26.63■■□□□ 1.85
CUX2O14529 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 IRF3-215ENST00000596822 823 ntTSL 3 BASIC26.63■■□□□ 1.85
CUX2O14529 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC26.63■■□□□ 1.85
CUX2O14529 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC26.63■■□□□ 1.85
CUX2O14529 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC26.63■■□□□ 1.85
CUX2O14529 LINC01144-201ENST00000626198 1710 ntBASIC26.63■■□□□ 1.85
CUX2O14529 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CUX2O14529 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC26.63■■□□□ 1.85
CUX2O14529 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC26.63■■□□□ 1.85
CUX2O14529 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CUX2O14529 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CUX2O14529 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC26.63■■□□□ 1.85
CUX2O14529 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC26.63■■□□□ 1.85
CUX2O14529 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC26.63■■□□□ 1.85
CUX2O14529 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CUX2O14529 RNF165-205ENST00000588679 2904 ntBASIC26.62■■□□□ 1.85
CUX2O14529 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CUX2O14529 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC26.62■■□□□ 1.85
CUX2O14529 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC26.62■■□□□ 1.85
CUX2O14529 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC26.62■■□□□ 1.85
CUX2O14529 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
CUX2O14529 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC26.62■■□□□ 1.85
CUX2O14529 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC26.62■■□□□ 1.85
CUX2O14529 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC26.62■■□□□ 1.85
CUX2O14529 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CUX2O14529 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CUX2O14529 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CUX2O14529 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC26.62■■□□□ 1.85
CUX2O14529 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC26.62■■□□□ 1.85
CUX2O14529 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CUX2O14529 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CUX2O14529 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC26.62■■□□□ 1.85
CUX2O14529 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC26.62■■□□□ 1.85
CUX2O14529 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC26.62■■□□□ 1.85
CUX2O14529 AC073150.1-201ENST00000450406 1084 ntBASIC26.62■■□□□ 1.85
CUX2O14529 ALG1L6P-201ENST00000515248 758 ntBASIC26.62■■□□□ 1.85
CUX2O14529 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC26.62■■□□□ 1.85
CUX2O14529 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC26.62■■□□□ 1.85
CUX2O14529 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
CUX2O14529 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
CUX2O14529 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC26.62■■□□□ 1.85
CUX2O14529 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC26.62■■□□□ 1.85
CUX2O14529 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC26.61■■□□□ 1.85
CUX2O14529 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC26.61■■□□□ 1.85
CUX2O14529 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC26.61■■□□□ 1.85
CUX2O14529 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC26.61■■□□□ 1.85
CUX2O14529 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC26.61■■□□□ 1.85
CUX2O14529 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CUX2O14529 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC26.61■■□□□ 1.85
CUX2O14529 RGS5-214ENST00000429865 754 ntTSL 3 BASIC26.61■■□□□ 1.85
CUX2O14529 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC26.61■■□□□ 1.85
CUX2O14529 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 AC018463.1-201ENST00000456674 917 ntBASIC26.61■■□□□ 1.85
CUX2O14529 GAPDHP40-201ENST00000505218 1006 ntBASIC26.61■■□□□ 1.85
CUX2O14529 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CUX2O14529 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms