Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UPK2O00526 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK2O00526 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UPK2O00526 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK2O00526 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK2O00526 AC142381.1-201ENST00000426099 345 ntBASIC12.83□□□□□ -0.36
UPK2O00526 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK2O00526 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK2O00526 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.83□□□□□ -0.36
UPK2O00526 RNA5SP410-201ENST00000516285 106 ntBASIC12.83□□□□□ -0.36
UPK2O00526 AC106730.1-201ENST00000566722 1090 ntBASIC12.83□□□□□ -0.36
UPK2O00526 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK2O00526 AC091812.2-201ENST00000619081 385 ntBASIC12.83□□□□□ -0.36
UPK2O00526 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK2O00526 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.83□□□□□ -0.36
UPK2O00526 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK2O00526 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK2O00526 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 REXO1L1P-202ENST00000608646 1974 ntBASIC12.82□□□□□ -0.36
UPK2O00526 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UPK2O00526 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UPK2O00526 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK2O00526 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 FAM220BP-201ENST00000377689 816 ntBASIC12.82□□□□□ -0.36
UPK2O00526 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK2O00526 RPS8P6-201ENST00000426177 609 ntBASIC12.82□□□□□ -0.36
UPK2O00526 FDX1P1-201ENST00000449115 551 ntBASIC12.82□□□□□ -0.36
UPK2O00526 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 SLC25A1P1-201ENST00000528351 927 ntBASIC12.82□□□□□ -0.36
UPK2O00526 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK2O00526 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.82□□□□□ -0.36
UPK2O00526 MIR4313-201ENST00000580760 101 ntBASIC12.82□□□□□ -0.36
UPK2O00526 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UPK2O00526 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK2O00526 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK2O00526 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK2O00526 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK2O00526 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK2O00526 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK2O00526 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK2O00526 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms