Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 AC232323.1-201ENST00000540724 2099 ntBASIC16.61■□□□□ 0.25
CCDC188H7C350 REXO1L5P-201ENST00000622260 2098 ntBASIC16.61■□□□□ 0.25
CCDC188H7C350 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC188H7C350 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC188H7C350 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC188H7C350 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC188H7C350 AC108751.1-201ENST00000490852 363 ntBASIC16.61■□□□□ 0.25
CCDC188H7C350 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC188H7C350 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC188H7C350 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 AC026748.1-201ENST00000624349 3251 ntBASIC16.61■□□□□ 0.25
CCDC188H7C350 AC148477.4-201ENST00000613430 1793 ntBASIC16.61■□□□□ 0.25
CCDC188H7C350 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC188H7C350 AL691432.1-201ENST00000596308 1422 ntBASIC16.61■□□□□ 0.25
CCDC188H7C350 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC188H7C350 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC188H7C350 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC188H7C350 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC188H7C350 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC188H7C350 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC188H7C350 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC188H7C350 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 VN2R19P-201ENST00000442399 1052 ntBASIC16.6■□□□□ 0.25
CCDC188H7C350 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC188H7C350 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC188H7C350 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC188H7C350 AC018892.3-201ENST00000623986 2499 ntBASIC16.6■□□□□ 0.25
CCDC188H7C350 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC188H7C350 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC188H7C350 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC188H7C350 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC188H7C350 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC188H7C350 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC188H7C350 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC188H7C350 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC188H7C350 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC188H7C350 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC188H7C350 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC188H7C350 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC188H7C350 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC188H7C350 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC188H7C350 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC188H7C350 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms