Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AL158047.1-201ENST00000445918 881 ntBASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FAM207BP-201ENST00000447172 505 ntBASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MTHFR-210ENST00000641407 2387 ntBASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 FAM197Y1-201ENST00000421178 764 ntBASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 UBE2SP1-201ENST00000450587 669 ntBASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 MIR6786-201ENST00000616843 113 ntBASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.95□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 FSCN1P1-201ENST00000568912 1481 ntBASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 GCSHP5-201ENST00000443090 522 ntBASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 AC098590.1-201ENST00000468126 897 ntBASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 B3GAT3P1-201ENST00000471720 806 ntBASIC13.94□□□□□ -0.18
BOLA2-SMG1P6H3BVE0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms