Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AC061975.2-201ENST00000581722 295 ntBASIC12.01□□□□□ -0.49
KNCNA6PVL3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AC009093.7-201ENST00000623853 1223 ntBASIC12.01□□□□□ -0.49
KNCNA6PVL3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KNCNA6PVL3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.01□□□□□ -0.49
KNCNA6PVL3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 AC046158.3-201ENST00000624947 2558 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12□□□□□ -0.49
KNCNA6PVL3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
KNCNA6PVL3 HNRNPFP1-201ENST00000391730 1133 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 GPS2P2-201ENST00000430745 888 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12□□□□□ -0.49
KNCNA6PVL3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12□□□□□ -0.49
KNCNA6PVL3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12□□□□□ -0.49
KNCNA6PVL3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KNCNA6PVL3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12□□□□□ -0.49
KNCNA6PVL3 AC026150.2-201ENST00000564693 1156 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12□□□□□ -0.49
KNCNA6PVL3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12□□□□□ -0.49
KNCNA6PVL3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 MIR6080-201ENST00000617359 66 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 AC084121.4-201ENST00000641598 221 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 AF228730.8-201ENST00000642140 221 ntBASIC12□□□□□ -0.49
KNCNA6PVL3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KNCNA6PVL3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12□□□□□ -0.49
KNCNA6PVL3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KNCNA6PVL3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12□□□□□ -0.49
KNCNA6PVL3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
KNCNA6PVL3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KNCNA6PVL3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms