Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 CICP4-201ENST00000447359 2812 ntBASIC16.6■□□□□ 0.25
SRRM3A6NNA2 AC013726.1-201ENST00000563747 2285 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 MIR943-201ENST00000401286 94 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CNN2P2-201ENST00000443536 909 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CNN2P3-201ENST00000450201 906 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AL136317.3-201ENST00000618497 906 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 AC009093.7-201ENST00000623853 1223 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRRM3A6NNA2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM3A6NNA2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM3A6NNA2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM3A6NNA2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SRRM3A6NNA2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SRRM3A6NNA2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 ARSEP1-201ENST00000420443 635 ntBASIC16.58■□□□□ 0.24
SRRM3A6NNA2 RHOQP3-201ENST00000437982 621 ntBASIC16.58■□□□□ 0.24
SRRM3A6NNA2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.58■□□□□ 0.24
SRRM3A6NNA2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 AC087481.3-201ENST00000602886 1894 ntBASIC16.57■□□□□ 0.24
SRRM3A6NNA2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.57■□□□□ 0.24
SRRM3A6NNA2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms