Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 LINC01101-201ENST00000622953 1884 ntBASIC13.69□□□□□ -0.22
TMEM235A6NFC5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 AC007292.2-201ENST00000593524 1812 ntBASIC13.69□□□□□ -0.22
TMEM235A6NFC5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 AC134407.2-201ENST00000625089 1978 ntBASIC13.69□□□□□ -0.22
TMEM235A6NFC5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM235A6NFC5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 PMS2P4-201ENST00000412466 1052 ntBASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 KRT18P31-201ENST00000506277 1292 ntBASIC13.68□□□□□ -0.22
TMEM235A6NFC5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 MIR3909-201ENST00000579518 119 ntBASIC13.68□□□□□ -0.22
TMEM235A6NFC5 AL365330.1-201ENST00000607459 531 ntBASIC13.68□□□□□ -0.22
TMEM235A6NFC5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM235A6NFC5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 MRPL20P1-201ENST00000400819 433 ntBASIC13.67□□□□□ -0.22
TMEM235A6NFC5 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.67□□□□□ -0.22
TMEM235A6NFC5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM235A6NFC5 AL121772.3-201ENST00000610840 674 ntBASIC13.67□□□□□ -0.22
TMEM235A6NFC5 REXO1L6P-202ENST00000619970 1078 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms