Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHISA3A0PJX4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 AC073439.1-201ENST00000624121 1774 ntBASIC13.91□□□□□ -0.18
SHISA3A0PJX4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 AC006504.5-208ENST00000588784 2401 ntBASIC13.91□□□□□ -0.18
SHISA3A0PJX4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 UPK3BP1-201ENST00000428678 509 ntBASIC13.91□□□□□ -0.18
SHISA3A0PJX4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHISA3A0PJX4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms