Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 AC139749.1-202ENST00000617529 3139 ntBASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SART3-203ENST00000546611 1184 ntBASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 AL732292.2-201ENST00000609649 430 ntBASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV18A0A075B6X5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 RPS15P9-201ENST00000494093 319 ntBASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV18A0A075B6X5 AGAP7P-201ENST00000582299 2062 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms