Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 ACA64.2-201ENST00000459014 129 ntBASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 KRT17P8-201ENST00000540749 863 ntBASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 RAB43P1-201ENST00000561790 589 ntBASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 MIR8072-201ENST00000614241 80 ntBASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 RN7SL399P-201ENST00000471648 279 ntBASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 AC092552.1-201ENST00000547243 906 ntBASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 WFDC1-204ENST00000613603 549 ntBASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 MIR6805-201ENST00000615055 62 ntBASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1G3Q9Y6M4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms