Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 ME2P1-201ENST00000426028 1970 ntBASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 BNIP3P1-202ENST00000550043 1585 ntBASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 AC022211.2-201ENST00000585075 2527 ntBASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 Z97205.2-201ENST00000564697 1639 ntBASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AP001282.1-201ENST00000531301 1499 ntBASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 ELK1P1-201ENST00000485699 580 ntBASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AC036164.1-201ENST00000570544 333 ntBASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 FLJ38576-201ENST00000623820 2459 ntBASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.41■□□□□ 0.54
CTDP1Q9Y5B0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 IGHV3-71-201ENST00000523324 359 ntBASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 CTBP2P3-201ENST00000585629 1255 ntBASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 LINC01115-203ENST00000606068 577 ntBASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.4■□□□□ 0.54
CTDP1Q9Y5B0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.54
CTDP1Q9Y5B0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CTDP1Q9Y5B0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.39■□□□□ 0.54
CTDP1Q9Y5B0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTDP1Q9Y5B0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTDP1Q9Y5B0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CTDP1Q9Y5B0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTDP1Q9Y5B0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTDP1Q9Y5B0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTDP1Q9Y5B0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms