Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 DUX4L27-201ENST00000554796 1261 ntBASIC17.49■□□□□ 0.39
L1RE1Q9UN81 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 AC018529.1-201ENST00000613063 361 ntBASIC17.49■□□□□ 0.39
L1RE1Q9UN81 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
L1RE1Q9UN81 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 AC125807.1-201ENST00000483097 614 ntBASIC17.48■□□□□ 0.39
L1RE1Q9UN81 RNA5SP410-201ENST00000516285 106 ntBASIC17.48■□□□□ 0.39
L1RE1Q9UN81 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 TCAF2P1-201ENST00000291129 2421 ntBASIC17.48■□□□□ 0.39
L1RE1Q9UN81 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
L1RE1Q9UN81 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 SNX18-202ENST00000343017 3140 ntBASIC17.47■□□□□ 0.39
L1RE1Q9UN81 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AL390955.2-201ENST00000603032 514 ntBASIC17.47■□□□□ 0.39
L1RE1Q9UN81 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
L1RE1Q9UN81 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms