Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 RNF216P1-203ENST00000404404 2427 ntBASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AP002414.2-201ENST00000591780 3365 ntBASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AC211486.1-202ENST00000416371 468 ntBASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 GPX1P2-201ENST00000429271 606 ntBASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AC098859.1-201ENST00000502915 1238 ntBASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AC211476.1-201ENST00000503899 468 ntBASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 YBX1P5-201ENST00000509441 847 ntBASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00474Q9P2X8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms