Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC012508.2-201ENST00000567613 1472 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 AL445209.1-201ENST00000607269 3491 ntBASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SPCS2P3-201ENST00000500401 656 ntBASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 AC022413.1-201ENST00000624602 984 ntBASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDC42SE1Q9NRR8 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms