Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CPNE5Q9HCH3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 RN7SL837P-201ENST00000463010 287 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 KRT18P34-201ENST00000488218 1270 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 DOC2GP-202ENST00000514950 1163 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC073389.1-201ENST00000595595 795 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AL512343.1-201ENST00000605837 169 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC004790.1-201ENST00000612686 536 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 AC144831.1-201ENST00000573312 2656 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 FOXO1B-201ENST00000504678 1527 ntBASIC15.48■□□□□ 0.07
CPNE5Q9HCH3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 FAM86MP-201ENST00000340703 885 ntBASIC15.47■□□□□ 0.07
CPNE5Q9HCH3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms