Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AMBRA1Q9C0C7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15□□□□□ -0.01
AMBRA1Q9C0C7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AMBRA1Q9C0C7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15□□□□□ -0.01
AMBRA1Q9C0C7 AC090616.6-203ENST00000579186 1945 ntBASIC15□□□□□ -0.01
AMBRA1Q9C0C7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15□□□□□ -0.01
AMBRA1Q9C0C7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 HCG4B-203ENST00000450128 991 ntBASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 AC105250.1-201ENST00000509378 2057 ntBASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AMBRA1Q9C0C7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 CRYGEP-201ENST00000412192 528 ntBASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 PGAM5P1-201ENST00000518923 814 ntBASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 AC064836.3-201ENST00000607928 673 ntBASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 AC112693.3-201ENST00000624819 1983 ntBASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AMBRA1Q9C0C7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 AC007191.1-201ENST00000623179 2995 ntBASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms