Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 TIMM8BP1-201ENST00000452384 211 ntBASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 RN7SL589P-201ENST00000481268 310 ntBASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 RNA5SP410-201ENST00000516285 106 ntBASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 AC026120.1-201ENST00000611536 926 ntBASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF3BQ9BZI7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 MIR346-201ENST00000362234 95 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SPDYE11-202ENST00000450699 704 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 FAM86C2P-203ENST00000528684 1004 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SPDYE9P-201ENST00000570642 692 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SPDYE10P-202ENST00000612005 668 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SPDYE8P-202ENST00000612377 668 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 AC105250.1-201ENST00000509378 2057 ntBASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF3BQ9BZI7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 AC004832.2-201ENST00000426397 482 ntBASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 AC092364.2-202ENST00000597012 1073 ntBASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 C20orf181-201ENST00000623918 480 ntBASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF3BQ9BZI7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms