Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 CHCHD2P3-201ENST00000603038 451 ntBASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPAP1Q9BWH6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 EEF1DP4-201ENST00000446006 880 ntBASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 SDHAP3-202ENST00000515467 728 ntBASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 AC106886.1-201ENST00000568660 600 ntBASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 AC092337.1-201ENST00000568699 1129 ntBASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPAP1Q9BWH6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 HAUS4P1-201ENST00000406739 1145 ntBASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms