Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 BX842568.4-201ENST00000421222 227 ntBASIC13.24□□□□□ -0.29
S1PR3Q99500 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.24□□□□□ -0.29
S1PR3Q99500 FAM58CP-201ENST00000435741 640 ntBASIC13.24□□□□□ -0.29
S1PR3Q99500 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.24□□□□□ -0.29
S1PR3Q99500 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.24□□□□□ -0.29
S1PR3Q99500 C20orf181-201ENST00000623918 480 ntBASIC13.24□□□□□ -0.29
S1PR3Q99500 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 SBF1P1-201ENST00000444527 5631 ntBASIC13.24□□□□□ -0.29
S1PR3Q99500 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.24□□□□□ -0.29
S1PR3Q99500 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.24□□□□□ -0.29
S1PR3Q99500 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.24□□□□□ -0.29
S1PR3Q99500 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.24□□□□□ -0.29
S1PR3Q99500 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
S1PR3Q99500 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
S1PR3Q99500 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
S1PR3Q99500 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
S1PR3Q99500 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.23□□□□□ -0.29
S1PR3Q99500 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
S1PR3Q99500 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.23□□□□□ -0.29
S1PR3Q99500 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.23□□□□□ -0.29
S1PR3Q99500 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 RN7SL589P-201ENST00000481268 310 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 AC098859.1-201ENST00000502915 1238 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 AC105233.2-201ENST00000523697 349 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 AF228730.5-201ENST00000530288 346 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.23□□□□□ -0.29
S1PR3Q99500 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 MIR3687-2-201ENST00000577708 61 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.23□□□□□ -0.29
S1PR3Q99500 MIR3687-1-201ENST00000614492 61 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
S1PR3Q99500 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.23□□□□□ -0.29
S1PR3Q99500 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.23□□□□□ -0.29
S1PR3Q99500 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
S1PR3Q99500 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.23□□□□□ -0.29
S1PR3Q99500 AP001282.1-201ENST00000531301 1499 ntBASIC13.23□□□□□ -0.29
S1PR3Q99500 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.23□□□□□ -0.29
S1PR3Q99500 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
S1PR3Q99500 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.22□□□□□ -0.29
S1PR3Q99500 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
S1PR3Q99500 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
S1PR3Q99500 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
S1PR3Q99500 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.22□□□□□ -0.29
S1PR3Q99500 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.22□□□□□ -0.29
S1PR3Q99500 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.22□□□□□ -0.29
S1PR3Q99500 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.22□□□□□ -0.29
S1PR3Q99500 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
S1PR3Q99500 AL671277.1-201ENST00000429656 993 ntBASIC13.22□□□□□ -0.29
S1PR3Q99500 MKNK2P1-201ENST00000437526 628 ntBASIC13.22□□□□□ -0.29
S1PR3Q99500 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms