Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNX18Q96RF0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 AC005252.3-201ENST00000623855 2258 ntBASIC14.63□□□□□ -0.07
SNX18Q96RF0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 IGLL3P-201ENST00000412472 434 ntBASIC14.63□□□□□ -0.07
SNX18Q96RF0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 AC245100.5-201ENST00000452108 331 ntBASIC14.63□□□□□ -0.07
SNX18Q96RF0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 AC112504.1-201ENST00000623415 1841 ntBASIC14.63□□□□□ -0.07
SNX18Q96RF0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNX18Q96RF0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.63□□□□□ -0.07
SNX18Q96RF0 AC092919.2-201ENST00000623631 1645 ntBASIC14.63□□□□□ -0.07
SNX18Q96RF0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 LINC02447-202ENST00000501888 2146 ntBASIC14.62□□□□□ -0.07
SNX18Q96RF0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 AC040169.1-201ENST00000565382 521 ntBASIC14.62□□□□□ -0.07
SNX18Q96RF0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 AL691403.2-201ENST00000618460 490 ntBASIC14.62□□□□□ -0.07
SNX18Q96RF0 AC007064.4-201ENST00000637740 555 ntBASIC14.62□□□□□ -0.07
SNX18Q96RF0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 CICP24-201ENST00000605464 2705 ntBASIC14.62□□□□□ -0.07
SNX18Q96RF0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX18Q96RF0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.62□□□□□ -0.07
SNX18Q96RF0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms