Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 AZGP1P1-201ENST00000411909 902 ntBASIC18.88■□□□□ 0.61
NEK1Q96PY6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 TSEN15P1-201ENST00000423257 515 ntBASIC18.88■□□□□ 0.61
NEK1Q96PY6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 MTND6P24-201ENST00000440466 518 ntBASIC18.88■□□□□ 0.61
NEK1Q96PY6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 AC092384.3-202ENST00000564646 2873 ntBASIC18.87■□□□□ 0.61
NEK1Q96PY6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEK1Q96PY6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.87■□□□□ 0.61
NEK1Q96PY6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.86■□□□□ 0.61
NEK1Q96PY6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.86■□□□□ 0.61
NEK1Q96PY6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 HIST3H2BA-201ENST00000436555 524 ntBASIC18.86■□□□□ 0.61
NEK1Q96PY6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 HNRNPUP1-201ENST00000554987 333 ntBASIC18.86■□□□□ 0.61
NEK1Q96PY6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 AC097359.3-201ENST00000603982 1210 ntBASIC18.86■□□□□ 0.61
NEK1Q96PY6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms