Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 BCRP1-201ENST00000444246 691 ntBASIC16.53■□□□□ 0.24
IFT43Q96FT9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 Z92544.3-201ENST00000624747 417 ntBASIC16.53■□□□□ 0.24
IFT43Q96FT9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT43Q96FT9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT43Q96FT9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 FAM58DP-201ENST00000428076 619 ntBASIC16.52■□□□□ 0.24
IFT43Q96FT9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 AC051619.7-201ENST00000568314 623 ntBASIC16.52■□□□□ 0.24
IFT43Q96FT9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.52■□□□□ 0.24
IFT43Q96FT9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT43Q96FT9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT43Q96FT9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.52■□□□□ 0.23
IFT43Q96FT9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT43Q96FT9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.52■□□□□ 0.23
IFT43Q96FT9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IFT43Q96FT9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IFT43Q96FT9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IFT43Q96FT9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 AL589702.1-201ENST00000641229 1509 ntBASIC16.51■□□□□ 0.23
IFT43Q96FT9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 SPDYE7P-202ENST00000420373 878 ntBASIC16.51■□□□□ 0.23
IFT43Q96FT9 GPS2P2-201ENST00000430745 888 ntBASIC16.51■□□□□ 0.23
IFT43Q96FT9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 AC073389.1-201ENST00000595595 795 ntBASIC16.51■□□□□ 0.23
IFT43Q96FT9 AL365330.1-201ENST00000607459 531 ntBASIC16.51■□□□□ 0.23
IFT43Q96FT9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT43Q96FT9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT43Q96FT9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms