Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 ALG1L5P-201ENST00000482043 771 ntBASIC16.9■□□□□ 0.3
TRIM11Q96F44 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC005829.1-201ENST00000570002 483 ntBASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AL450472.2-201ENST00000603663 1156 ntBASIC16.9■□□□□ 0.3
TRIM11Q96F44 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM11Q96F44 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
TRIM11Q96F44 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM11Q96F44 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 CEND1P1-201ENST00000451006 455 ntBASIC16.89■□□□□ 0.29
TRIM11Q96F44 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AC073347.1-201ENST00000421633 2643 ntBASIC16.89■□□□□ 0.29
TRIM11Q96F44 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM11Q96F44 TSPY26P-202ENST00000565928 3884 ntBASIC16.89■□□□□ 0.29
TRIM11Q96F44 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM11Q96F44 AC105250.1-201ENST00000509378 2057 ntBASIC16.89■□□□□ 0.29
TRIM11Q96F44 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PPT1-215ENST00000641471 2368 ntBASIC16.88■□□□□ 0.29
TRIM11Q96F44 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM11Q96F44 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM11Q96F44 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms