Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.17■□□□□ 0.5
ERCC4Q92889 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.17■□□□□ 0.5
ERCC4Q92889 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC4Q92889 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC4Q92889 AC034105.1-201ENST00000563488 319 ntBASIC18.17■□□□□ 0.5
ERCC4Q92889 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC4Q92889 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
ERCC4Q92889 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.17■□□□□ 0.5
ERCC4Q92889 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC4Q92889 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC4Q92889 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERCC4Q92889 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ERCC4Q92889 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC4Q92889 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 AC023157.3-201ENST00000619086 2088 ntBASIC18.16■□□□□ 0.5
ERCC4Q92889 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC4Q92889 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 AC006486.2-201ENST00000624246 2199 ntBASIC18.16■□□□□ 0.5
ERCC4Q92889 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC4Q92889 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC4Q92889 KRT19P2-202ENST00000557173 1012 ntBASIC18.16■□□□□ 0.5
ERCC4Q92889 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERCC4Q92889 AC064836.3-201ENST00000607928 673 ntBASIC18.16■□□□□ 0.5
ERCC4Q92889 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC4Q92889 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERCC4Q92889 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC4Q92889 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ERCC4Q92889 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.15■□□□□ 0.5
ERCC4Q92889 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ERCC4Q92889 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ERCC4Q92889 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.15■□□□□ 0.5
ERCC4Q92889 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ERCC4Q92889 AL109954.1-202ENST00000564051 2148 ntBASIC18.15■□□□□ 0.5
ERCC4Q92889 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.15■□□□□ 0.5
ERCC4Q92889 AL138918.1-201ENST00000568306 659 ntBASIC18.15■□□□□ 0.5
ERCC4Q92889 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.15■□□□□ 0.5
ERCC4Q92889 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC4Q92889 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.15■□□□□ 0.5
ERCC4Q92889 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ERCC4Q92889 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms