Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SHC3Q92529 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHC3Q92529 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.98■□□□□ 0.31
SHC3Q92529 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SHC3Q92529 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.98■□□□□ 0.31
SHC3Q92529 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.98■□□□□ 0.31
SHC3Q92529 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.98■□□□□ 0.31
SHC3Q92529 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 AC079781.4-201ENST00000641908 219 ntBASIC16.98■□□□□ 0.31
SHC3Q92529 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHC3Q92529 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC3Q92529 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC3Q92529 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.97■□□□□ 0.31
SHC3Q92529 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 HYMAI-201ENST00000635591 3347 ntBASIC16.97■□□□□ 0.31
SHC3Q92529 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SHC3Q92529 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHC3Q92529 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.97■□□□□ 0.31
SHC3Q92529 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.97■□□□□ 0.31
SHC3Q92529 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.97■□□□□ 0.31
SHC3Q92529 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.97■□□□□ 0.31
SHC3Q92529 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.97■□□□□ 0.31
SHC3Q92529 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.97■□□□□ 0.31
SHC3Q92529 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.97■□□□□ 0.31
SHC3Q92529 AP001160.2-201ENST00000596071 487 ntBASIC16.97■□□□□ 0.31
SHC3Q92529 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.97■□□□□ 0.31
SHC3Q92529 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.97■□□□□ 0.31
SHC3Q92529 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.97■□□□□ 0.31
SHC3Q92529 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC3Q92529 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SHC3Q92529 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC3Q92529 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC3Q92529 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC3Q92529 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC3Q92529 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC3Q92529 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC3Q92529 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC3Q92529 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC3Q92529 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms