Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 AC138035.3-201ENST00000622706 2791 ntBASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AC007292.2-201ENST00000593524 1812 ntBASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AC008677.1-201ENST00000519230 1561 ntBASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AC018845.2-201ENST00000568326 409 ntBASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 REXO1L3P-201ENST00000622202 1288 ntBASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AC007064.4-201ENST00000637740 555 ntBASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40AQ8WXH6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC005622.1-201ENST00000636801 1703 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 RPSAP43-201ENST00000402237 625 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 IGLL3P-201ENST00000412472 434 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 MCCD1P2-201ENST00000423228 335 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 GPX1P2-201ENST00000429271 606 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC112482.1-201ENST00000492080 688 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 CXCL1P1-201ENST00000502804 216 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC010327.4-202ENST00000591484 748 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 AC129492.6-201ENST00000611383 1305 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 U82695.1-201ENST00000635752 1889 ntBASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40AQ8WXH6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms