Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 AGAP7P-201ENST00000582299 2062 ntBASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 AGAP14-201ENST00000624701 2060 ntBASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 AC098859.1-201ENST00000502915 1238 ntBASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 RNA5SP419-201ENST00000515908 135 ntBASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 AC004877.2-201ENST00000623941 599 ntBASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 AC106881.1-201ENST00000605849 3329 ntBASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 BCAR1-209ENST00000546196 1340 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 CICP23-201ENST00000605013 2741 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 FDX1P1-201ENST00000449115 551 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 AC009078.2-202ENST00000463353 338 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 AC079776.4-201ENST00000511039 504 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 KRT19P2-202ENST00000557173 1012 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 AC104692.2-201ENST00000603054 253 ntBASIC16.02■□□□□ 0.16
SLC44A1Q8WWI5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.02■□□□□ 0.15
SLC44A1Q8WWI5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 FOXO1B-201ENST00000504678 1527 ntBASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms