Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
STAG1Q8WVM7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
STAG1Q8WVM7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 KRT18P64-201ENST00000434946 1219 ntBASIC18.72■□□□□ 0.59
STAG1Q8WVM7 SLED1-202ENST00000512051 380 ntBASIC18.72■□□□□ 0.59
STAG1Q8WVM7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.72■□□□□ 0.59
STAG1Q8WVM7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
STAG1Q8WVM7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 AL596257.1-201ENST00000641463 2694 ntBASIC18.71■□□□□ 0.59
STAG1Q8WVM7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 AL589987.1-201ENST00000453380 819 ntBASIC18.71■□□□□ 0.59
STAG1Q8WVM7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 SPDYE22P-201ENST00000582158 798 ntBASIC18.71■□□□□ 0.59
STAG1Q8WVM7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 AC008894.3-201ENST00000624324 3103 ntBASIC18.71■□□□□ 0.59
STAG1Q8WVM7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
STAG1Q8WVM7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
STAG1Q8WVM7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
STAG1Q8WVM7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.71■□□□□ 0.58
STAG1Q8WVM7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms