Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 AC132938.4-201ENST00000623835 848 ntBASIC19.11■□□□□ 0.65
SNED1Q8TER0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 PCDHA12-202ENST00000613593 2588 ntBASIC19.11■□□□□ 0.65
SNED1Q8TER0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.11■□□□□ 0.65
SNED1Q8TER0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNED1Q8TER0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 FXNP2-201ENST00000411625 547 ntBASIC19.1■□□□□ 0.65
SNED1Q8TER0 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.1■□□□□ 0.65
SNED1Q8TER0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 AC005077.2-201ENST00000449786 690 ntBASIC19.1■□□□□ 0.65
SNED1Q8TER0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 RNA5SP486-201ENST00000515961 83 ntBASIC19.1■□□□□ 0.65
SNED1Q8TER0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 AC244452.3-201ENST00000636814 210 ntBASIC19.1■□□□□ 0.65
SNED1Q8TER0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNED1Q8TER0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNED1Q8TER0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.09■□□□□ 0.65
SNED1Q8TER0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 ECM1P1-201ENST00000604092 1279 ntBASIC19.09■□□□□ 0.65
SNED1Q8TER0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 AC138627.1-207ENST00000641560 1006 ntBASIC19.09■□□□□ 0.65
SNED1Q8TER0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SNED1Q8TER0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNED1Q8TER0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNED1Q8TER0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNED1Q8TER0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 EIF4HP1-201ENST00000453115 687 ntBASIC19.08■□□□□ 0.65
SNED1Q8TER0 AC104982.3-201ENST00000581995 514 ntBASIC19.08■□□□□ 0.65
SNED1Q8TER0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.08■□□□□ 0.65
SNED1Q8TER0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNED1Q8TER0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms