Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AC004987.2-201ENST00000395959 1148 ntBASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 TREML5P-201ENST00000421694 576 ntBASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AC069120.2-201ENST00000524091 540 ntBASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AC005498.2-205ENST00000593218 784 ntBASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AC007967.4-201ENST00000614700 386 ntBASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 AC136621.1-201ENST00000624017 2304 ntBASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 AP003680.1-201ENST00000598970 3660 ntBASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 EEF1DP4-201ENST00000446006 880 ntBASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 IGHV3-42-201ENST00000520410 361 ntBASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 AC105250.1-201ENST00000509378 2057 ntBASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 FO538757.1-201ENST00000623083 1397 ntBASIC18.67■□□□□ 0.58
SMARCC2Q8TAQ2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 REXO1L1P-202ENST00000608646 1974 ntBASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 MIR4313-201ENST00000580760 101 ntBASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCC2Q8TAQ2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms