Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC025678.2-201ENST00000562061 970 ntBASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 MIR4453-201ENST00000584019 89 ntBASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC007967.4-201ENST00000614700 386 ntBASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC093512.1-201ENST00000617969 520 ntBASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH19Q8TAB3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AC104640.1-201ENST00000562617 2109 ntBASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AC022532.1-201ENST00000624563 1728 ntBASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AC009090.5-201ENST00000624886 2285 ntBASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AZGP1P1-201ENST00000411909 902 ntBASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 AC097359.3-201ENST00000603982 1210 ntBASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 RN7SL828P-201ENST00000607615 303 ntBASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH19Q8TAB3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
PCDH19Q8TAB3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PCDH19Q8TAB3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.46■□□□□ 0.22
PCDH19Q8TAB3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PCDH19Q8TAB3 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.46■□□□□ 0.22
PCDH19Q8TAB3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PCDH19Q8TAB3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 MIR770-201ENST00000390219 98 ntBASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms