Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AC021723.1-201ENST00000486306 515 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 RCC2P8-201ENST00000502779 1035 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AL162426.1-201ENST00000624141 743 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 AC004923.1-202ENST00000642106 209 ntBASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL22A1Q8NFW1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 AL158070.2-201ENST00000623713 1621 ntBASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 AC097065.1-201ENST00000425737 517 ntBASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.7■□□□□ 0.9
COL22A1Q8NFW1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 AC007787.1-201ENST00000588095 1583 ntBASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 RPL18P13-201ENST00000478088 569 ntBASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 AC141586.1-203ENST00000567242 366 ntBASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 AC138466.3-201ENST00000619983 221 ntBASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL22A1Q8NFW1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 AC018892.3-201ENST00000623986 2499 ntBASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 AC242376.2-201ENST00000619355 883 ntBASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 AC025271.4-201ENST00000621477 1726 ntBASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 CLUHP2-201ENST00000426660 1303 ntBASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 AC141586.5-201ENST00000624546 2050 ntBASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL22A1Q8NFW1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms