Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
BEST4Q8NFU0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 AC041040.2-201ENST00000622926 2899 ntBASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 RCN1P1-201ENST00000400413 996 ntBASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 PMS2P1-201ENST00000431037 1228 ntBASIC13.88□□□□□ -0.19
BEST4Q8NFU0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 AP001350.2-201ENST00000625104 1094 ntBASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 AF228730.7-201ENST00000641842 219 ntBASIC13.88□□□□□ -0.19
BEST4Q8NFU0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 SLC22A20-204ENST00000530038 1673 ntBASIC13.88□□□□□ -0.19
BEST4Q8NFU0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
BEST4Q8NFU0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 AL353732.1-201ENST00000569618 1459 ntBASIC13.87□□□□□ -0.19
BEST4Q8NFU0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 TMPOP1-202ENST00000424642 1267 ntBASIC13.87□□□□□ -0.19
BEST4Q8NFU0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 AP001269.4-201ENST00000609611 512 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms